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I recently had a course in developmental biology and this is what I can remember the best:
From the moment of fertilization, the egg has a 'polarity', thus a direction like up and down, left and right etc. This can be established by e.g. the entry point of the sperm or protein produced by the mother in one side of the egg. From here on out protein gradients and interactions on cell membranes specify where cells are and thus what kind of tissue they should become
This early polarity leads to a certain pattern of cell division. An important part of this is the folding in of tissue layers called gastrulation, creating the beginning for the gastrointestinal tract.
In vertebrates a streak starts to form in the embryo. This is the start of the vertebrae and the neural tube in it. Also blocks of cells called somites start to form. These blocks are very important for all kinds of tissues in the body.
Hox genes make the cells in somites get an identity like head, arm etc. So in the end Hox genes are probably what you are looking for. If leg Hox genes are expressed where fruitfly normally have antennae, you get this horror:
Thank you! I will read up on that.
So, a core part of my question is what causes certain genes to be expressed in certain places in the body, and specifically how this comes about from genetics alone (i.e. not artificially in lab experiments). In my past searches I did find some info about forcing gene expression in places where it wouldn't normally happen, which creates horrors similar to the one you shared, but I never found an answer for how this is controlled in natural development. Hox genes seem to be the answer I'm looking for :)
Here’s a fantastic and entertaining short video on how it works: https://youtu.be/ydqReeTV_vk?si=AyKJPZIzwaSCvZxv
How is this so good hole crap
I have no idea, he operates on his own level. All of his videos are top quality.