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Genuine question - doesn't this leave you open to loss of data from database corruption or an app failure (or human error, accidentally deleting a bunch of pages, for example)?
I've used "sync as backup" a lot, and run into these kinds of issues (it's my current OneNote "backup" strategy). I'm just not familiar enough with Joplin to know what risks this exposes.
There is a fail-safe switch in settings preventing the deletion of local copy if the remote is empty
Well that's something anyway, though I wouldn't rely on it - sometimes things happen.
I'm sure there's a way to do proper backups of database data (e.g. Incrementals, full, etc), that would get the changes.
That's always handled by other teams for systems I've deployed, so I'm joy familiar with current approaches.