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Let me add the following: the problem is that that metadata is all over the place AND you can't remove it from those 3rd party servers. Also there's a ton of questionable stuff like read receipts and reactions that are never encrypted (not sure if this was fixed already). XMPP with OMEMO enables will encrypt everything.
Currently the OMEMO as implemented in most clients only encrypts message content, but not the meta-data. There is a newer, sadly incompatible version that encrypts more, but few XMPP clients support it (AFAIK only Kaidan and Moxxy).
About the metadata part: one of the issues with Matrix is that it considers some stuff like read receipts as metadata. In XMPP all that information is special messages inside your conversation thus they get encrypted as well.