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I think a lot of it stems from ACL issues, cause I run it on a TrueNAS machine. If I pointed any other container even near it, it would do weird stuff with the permissions. I was also using docker volumes (because it wouldn't let me hard mount the db mounts on the machine) and it would randomly seem to wipe them? That may have been more of a user error issue.
I tried it literally as default as possible and couldn't get the permissions working correctly, I did also try the ultra-manual install and had slightly better results, but it still stopped working randomly. I also had some random issues with networking but I got those figured out eventually.